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Dynamic Bioimaging Lab


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Dynamic Bioimaging Lab

Logo UHasselt Universiteit Hasselt - Knowledge in action

PUBLICATIONS

* corresponding author, ° shared (first) authorship

An up-to-date publication list is also on Pubmed, ORCID, Google Scholar and Scopus.


    Vandenberk N, Hofkens J, Hendrix J*, "Dynamic structural biology using single-molecule FRET." Molecules (review, in preparation).

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    Borrenberghs D, Dirix L, Cereseto A, Hofkens J, Debyser Z* and Hendrix J* , "Post-mitotic BET-induced reshaping of integrase quaternary structure supports wild-type MLV integration" Nucleic Acids Research (in revision).

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    Hellenkamp B°, Schmid S°, Adariani SR, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, Gebhardt C, Götz M, Gouridis G, Gratton E, Ha T, Hao P, Hanke CA, Hartmann A, Hendrix J, Hildebrandt LL, Hirschfeld V, Hohlbein J, Hua B, Hübner CG, Kallis E, Kapanidis AN, Kim JY, Krainer G, Lamb DC, Lee NK, Lemke EA, Levesque B, Levitus M, McCann JJ, Naredi-Rainer N, Nettels D, Ngo T, Qiu R, Robb NC, Röcker C, Sanabria H, Schlierf M, Schröder T, Schuler B, Seidel H, Streit L, Thurn J, Tinnefeld P, Tyagi S, Vandenberk N, Vera AM, Weninger KR, Wünsch B, Yanez-Orozco IS, Michaelis J*, Seidel CAM*, Craggs TD* and Hugel T, "Precision and accuracy of single-molecule FRET measurements - a multi-laboratory benchmark study" Nature Methods 2018, 15:669–676

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    Barth A, Hendrix J, Fried D, Barak Y, Bayer EA, Lamb DC*, "Dynamic interactions of type I cohesin modules fine-tune the structure of the cellulosome of Clostridium thermocellum" Proceedings of the National Academy of Sciences USA (in revision).

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    Vandenberk N, Karamanou S, Portaliou AG, Zorzini A, Hofkens J, Hendrix J*, Economou A*, "The preprotein binding domain of SecA displays intrinsic rotational dynamics." Structure (accepted)

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    Schrimpf W°, Barth A°, Hendrix J and Lamb DC, "PAM: A Framework for Integrated Analysis of Imaging, Single-Molecule, and Ensemble Fluorescence Data." Biophysical Journal, April 10, 2018, 114 (7), p1518-1528.

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    Huang H, Yuan H, Janssen KPF, Solis-Fernandez G, Wang Y, Tan CYX, Jonckheere D, Debroye E, Long JL, Hendrix J, Hofkens J, Steele JA, Roeffaers, MBJ., "Efficient and Selective Photocatalytic Oxidation of Benzylic Alcohols with Hybrid Organic-Inorganic Perovskite Materials." ACS Energy Letters, May 2018, 3(4), pp755-759

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    Talavera A°, Hendrix J°, Versées W, Jurėnas D, Van Nerom K, Vandenberk N, Singh RK, Konijnenberg A, De Gieter S, Castro-Roa D, Barth A, De Greve H, Sobott F, Hofkens J, Zenkin N, Loris R, Garcia-Pino A, "Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors." Science Advances. 2018 Mar 14; 4(3), eaap9714

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    Vandenberk N, Barth A, Borrenberghs D, Hofkens J, Hendrix J, "Evaluation of Blue and Far-Red Dye Pairs in Single-Molecule Förster Resonance Energy Transfer Experiments." J. Phys. Chem. B. March 15, 2018; 122(15), pp 4249–4266

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    Schrimpf W°, Lemmens V°, Smisdom N, Ameloot M, Lamb DC*, Hendrix J*, "Crosstalk-free multicolor RICS using spectral weighting." Methods. 2018 May 1;140-141:97-111

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    Rosam M, Krader D, Nickels C, Hochmair J, Back KC, Agam G, Barth A, Zeymer C, Hendrix J, Schneider M, Antes I, Reinstein J, Lamb DC, Buchner J., "Bap (Sil1) regulates the molecular chaperone BiP by coupling release of nucleotide and substrate." Nat Struct Mol Biol. 2018 Jan;25(1):90-100.

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    Burger VM, Vandervelde A, Hendrix J, Konijnenberg A, Sobott F, Loris R, Stultz CM., "Hidden States within Disordered Regions of the CcdA Antitoxin Protein." J Am Chem Soc. 2017 Feb 22;139(7):2693-2701

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    Borrenberghs D, Dirix L, De Wit F, Rocha S, Blokken J, De Houwer S, Gijsbers R, Christ F, Hofkens J, Hendrix J*, Debyser Z*, "Dynamic Oligomerization of Integrase Orchestrates HIV Nuclear Entry." Sci Rep. 2016 Nov 10;6:36485

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    Hendrix J*, Dekens T, Schrimpf W, Lamb DC*, "Arbitrary-Region Raster Image Correlation Spectroscopy." Biophys J. 2016 Oct 18;111(8):1785-1796

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    Hendrix J, Baumgärtel V, Schrimpf W, Ivanchenko S, Digman MA, Gratton E, Kräusslich HG, Müller B, Lamb DC., “Live-cell observation of cytosolic HIV-1 assembly onset reveals RNA-interacting Gag oligomers.” J Cell Biol. 2015 Aug 17;210(4):629-46

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    Röhl A, Wengler D, Madl T, Lagleder S, Tippel F, Herrmann M, Hendrix J, Richter K, Hack G, Schmid AB, Kessler H, Lamb DC, Buchner J., “Hsp90 regulates the dynamics of its cochaperone Sti1 and the transfer of Hsp70 between modules.” Nat Commun. 2015 Apr 8;6:6655

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    Ozgen H, Schrimpf W, Hendrix J, de Jonge JC, Lamb DC, Hoekstra D, Kahya N, Baron W., “The lateral membrane organization and dynamics of myelin proteins PLP and MBP are dictated by distinct galactolipids and the extracellular matrix.” PLoS One. 2014 Jul 8;9(7):e101834

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    Borrenberghs D, Thys W, Rocha S, Demeulemeester J, Weydert C, Dedecker P, Hofkens J, Debyser Z*, Hendrix J*., “HIV virions as nanoscopic test tubes for probing oligomerization of the integrase enzyme.” ACS Nano. 2014 Apr 22;8(4):3531-45

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    Hendrix J°, van Heertum B°, Vanstreels E, Daelemans D, De Rijck J., “Dynamics of the ternary complex formed by c-Myc interactor JPO2, transcriptional co-activator LEDGF/p75, and chromatin.” J Biol Chem. 2014 May 2;289(18):12494-506

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    Hendrix J*, Schrimpf W, Höller M, Lamb DC*., “Pulsed interleaved excitation fluctuation imaging.”. Biophys J. 2013 Aug 20;105(4):848-61

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    De Graeve S, Marinelli S, Stolz F, Hendrix J, Vandamme J, Engelborghs Y, Van Dijck P, Thevelein JM., “Mammalian ribosomal and chaperone protein RPS3A counteracts α-synuclein aggregation and toxicity in a yeast model system.”. Biochem J. 2013 Nov 1;455(3):295-306

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    Desimmie BA, Schrijvers R, Demeulemeester J, Borrenberghs D, Weydert C, Thys W, Vets S, Van Remoortel B, Hofkens J, De Rijck J, Hendrix J, Bannert N, Gijsbers R, Christ F, Debyser Z., “LEDGINs inhibit late stage HIV-1 replication by modulating integrase multimerization in the virions.”. Retrovirology. 2013 May 30;10:57

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    Hendrix J, Lamb DC., “Pulsed interleaved excitation: principles and applications.”. Methods Enzymol. 2013;518:205-43

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    Desimmie BA, Humbert M, Lescrinier E, Hendrix J, Vets S, Gijsbers R, Ruprecht RM, Dietrich U, Debyser Z, Christ F., “Phage display-directed discovery of LEDGF/p75 binding cyclic peptide inhibitors of HIV replication.”. Mol Ther. 2012 Nov;20(11):2064-75

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    McNeely M°, Hendrix J°, Busschots K, Boons E, Deleersnijder A, Gerard M, Christ F, Debyser Z., “In vitro DNA tethering of HIV-1 integrase by the transcriptional coactivator LEDGF/p75.”. J Mol Biol. 2011 Jul 29;410(5):811-30

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    Cuyvers S, Hendrix J, Dornez E, Engelborghs Y, Delcour JA, Courtin CM., “Both substrate hydrolysis and secondary substrate binding determine xylanase mobility as assessed by FRAP.”. J Phys Chem B. 2011 Apr 28;115(16):4810-7

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    Hendrix J, Gijsbers R, De Rijck J, Voet A, Hotta J, McNeely M, Hofkens J, Debyser Z, Engelborghs Y., “The transcriptional co-activator LEDGF/p75 displays a dynamic scan-and-lock mechanism for chromatin tethering.”. Nucleic Acids Res. 2011 Mar;39(4):1310-25

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    Nath S, Meuvis J, Hendrix J, Carl SA, Engelborghs Y., “Early aggregation steps in alpha-synuclein as measured by FCS and FRET: evidence for a contagious conformational change.”. Biophys J. 2010 Apr 7;98(7):1302-11

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    Řičicová M, Kucharíková S, Tournu H, Hendrix J, Bujdáková H, Van Eldere J, Lagrou K, Van Dijck P., “Candida albicans biofilm formation in a new in vivo rat model.”. Microbiology. 2010 Mar;156(Pt 3):909-919

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    Briers Y, Schmelcher M, Loessner MJ, Hendrix J, Engelborghs Y, Volckaert G, Lavigne R., “The high-affinity peptidoglycan binding domain of Pseudomonas phage endolysin KZ144.”. Biochem Biophys Res Commun. 2009 May 29;383(2):187-91

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    Bartholomeeusen K, Christ F, Hendrix J, Rain JC, Emiliani S, Benarous R, Debyser Z, Gijsbers R, De Rijck J., “Lens epithelium-derived growth factor/p75 interacts with the transposase-derived DDE domain of PogZ.”. J Biol Chem. 2009 Apr 24;284(17):11467-77

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    Hendrix J, Flors C, Dedecker P, Hofkens J, Engelborghs Y., “Dark states in monomeric red fluorescent proteins studied by fluorescence correlation and single molecule spectroscopy.”. Biophys J. 2008 May 15;94(10):4103-13

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    Buyens K, Lucas B, Raemdonck K, Braeckmans K, Vercammen J, Hendrix J, Engelborghs Y, De Smedt SC, Sanders NN., “A fast and sensitive method for measuring the integrity of siRNA-carrier complexes in full human serum.”. J Control Release. 2008 Feb 18;126(1):67-76

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    Hombrouck A, De Rijck J, Hendrix J, Vandekerckhove L, Voet A, De Maeyer M, Witvrouw M, Engelborghs Y, Christ F, Gijsbers R, Debyser Z., “Virus evolution reveals an exclusive role for LEDGF/p75 in chromosomal tethering of HIV.”. PLoS Pathog. 2007 Mar;3(3):e47

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    De Rijck J, Vandekerckhove L, Gijsbers R, Hombrouck A, Hendrix J, Vercammen J, Engelborghs Y, Christ F, Debyser Z., “Overexpression of the lens epithelium-derived growth factor/p75 integrase binding domain inhibits human immunodeficiency virus replication.”. J Virol. 2006 Dec;80(23):11498-509

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